setupArms: panConusig::setupArms
In UCL-Research-Department-of-Pathology/panConusig: Pan-cancer copy number signatures analysis
View source: R/getRecurrence.R
setupArms R Documentation
panConusig::setupArms
Description
Setup chromosome arm information for use in plotting recurrent signatures.
Usage
setupArms(windowGR)
Arguments
windowGR
GenomicRanges object of genomic bins that the genome has been split into. See setupWindows().
Value
A list of chromosome arm information as a matrix ([[arms]]), chromosome arm information as a GenomicRanges object ([[armsGR]]) and overlaps between chromosome arms and genomic bins ([[armsOverlaps]]).
UCL-Research-Department-of-Pathology/panConusig documentation built on March 25, 2022, 12:18 a.m.
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View source: R/getRecurrence.R
| setupArms | R Documentation |
panConusig::setupArms
Description
Setup chromosome arm information for use in plotting recurrent signatures.
Usage
setupArms(windowGR)
Arguments
windowGR |
GenomicRanges object of genomic bins that the genome has been split into. See setupWindows(). |
Value
A list of chromosome arm information as a matrix ([[arms]]), chromosome arm information as a GenomicRanges object ([[armsGR]]) and overlaps between chromosome arms and genomic bins ([[armsOverlaps]]).
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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