ScpModelFit-class: Class to store the components of an estimated model for a...

In UCLouvain-CBIO/scp: Mass Spectrometry-Based Single-Cell Proteomics Data Analysis

Class to store the components of an estimated model for a feature

Description

An ScpModelFit object is expected to be stored as a list element in the scpModelFitList of an ScpModel object. The ScpModelFit object should never be accessed directly by the user. Refer to the ScpModel for a list of function to access the information in an ScpModelFit. The ScpModelFit class contains several slots that contain the model output for a feature:

• n: an integer, the number of observations for the feature

• p: an integer, the number of coefficient to estimate

• coefficients: a numeric vector with the estimated coefficients

• residuals: a numeric vector with the estimated residuals

• effects: a List with the

• df: an integer providing the number of degrees of freedom of the model estimation

• var: a numeric vector with the residual variance of the model estimation

• uvcov: the unscaled variance covariance matrix

• levels: a named List where each elements corresponds to a categorical model variable and contains a vector with the possible categories.

Author(s)

Christophe Vanderaa, Laurent Gatto

See Also

ScpModel for a description of the class that relies on ScpModelFit

Examples

new("ScpModelFit") ## this should never be used by the user

UCLouvain-CBIO/scp documentation built on May 5, 2024, 1:17 a.m.