normalize_intensities: Normalize intensities
In UNIL-PAF/pumbaR: Parse MaxQuant data and compute theoretical molecular weights for every slice.
View source: R/normalization.R
normalize_intensities R Documentation
Normalize intensities
Description
Normalize intensities by dividing every entry by the total sum of
intensities over all slices and proteins. Gives back a data-frame
with normalized intensities.
Usage
normalize_intensities(ints)
Arguments
ints
The slice intensities from a proteinGroups.txt file.
Examples
proteinGroups_path <-
system.file("extdata", "Conde_9508_sub.txt", package = "pumbaR")
pg <- load_MQ(proteinGroups_path)
ints <- get_intensities(pg)
norm_ints <- normalize_intensities(ints)
UNIL-PAF/pumbaR documentation built on June 9, 2022, 6:31 p.m.
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View source: R/normalization.R
| normalize_intensities | R Documentation |
Normalize intensities
Description
Normalize intensities by dividing every entry by the total sum of intensities over all slices and proteins. Gives back a data-frame with normalized intensities.
Usage
normalize_intensities(ints)
Arguments
ints |
The slice intensities from a proteinGroups.txt file. |
Examples
proteinGroups_path <-
system.file("extdata", "Conde_9508_sub.txt", package = "pumbaR")
pg <- load_MQ(proteinGroups_path)
ints <- get_intensities(pg)
norm_ints <- normalize_intensities(ints)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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