getBeta: Extract Beta value.
In USCbiostats/ENmixUSC: Data preprocessing and quality control for Illumina HumanMethylation450 and MethylationEPIC BeadChip (USC version)
Description
Usage
Arguments
Value
Author(s)
Description
Extract Methylation Beta value, Beta = Meth / (Meth + Unmeth + offset)
Usage
1
Arguments
mdat
An object of class MethylSet.
type
type="Illumina" sets offset=100 as per Genome Studio.
offset
offset in calculating beta ratio
Value
beta: a matrix of beta values
Author(s)
Zongli Xu
USCbiostats/ENmixUSC documentation built on June 1, 2019, 3:55 a.m.
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Description Usage Arguments Value Author(s)
Description
Extract Methylation Beta value, Beta = Meth / (Meth + Unmeth + offset)
Usage
1 |
Arguments
mdat |
An object of class |
type |
type="Illumina" sets offset=100 as per Genome Studio. |
offset |
offset in calculating beta ratio |
Value
beta: a matrix of beta values
Author(s)
Zongli Xu
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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