powstreams: High-level functions for accessing the Continental Stream...

In USGS-R/powstreams: powstreams

High-level functions for accessing the Continental Stream Metabolism data

Description

This package contains functions that make it easy for R users to use the Powell Center project data in particular. For lower-level functions specific to the Powell Center project, see mda.streams, and for still lower-level functions generic to all ScienceBase tasks, see sbtools.

Interactively exploring data

• explore_map - explore site metadata with an interactive map in a web browser

• explore_timeseries - explore timeseries data with interactive graphs in a web browser

• explore_model - explore a metabolism model with interactive graphs in a web browser

Logging into ScienceBase

• login_sb - log into SB with your myUSGS credentials

Querying ScienceBase

• list_sites - list the sites stored on SB

• list_tses - list the timeseries data on SB for a site

• summarize_ts - get date ranges, num rows, etc. for a ts

• list_metab_runs - list the metabolism modeling runs on SB

• list_metab_run_files - list the raw files from one modeling run

• list_metab_models - list the metab_model objects on SB

• search_sites - search the sites on SB

• search_metab_models - search the metab_models on SB

• search_metab_runs - search the metab_runs on SB

Navigating ScienceBase

• locate_folder - find a high-level folder on the SB website

• locate_meta - find a site data table on the SB website

• locate_metab_model - find a metab_model object on the SB website

• locate_metab_run - find a metabolism modeling run folder on the SB website

• locate_site - find a site folder on the SB website

• locate_ts - find a timeseries data item on the SB website

Reading data from ScienceBase

• list_sites - get a list of sites on SB

• get_site_info - reports basic site information

• view_google_map - reports basic site information

• get_meta - loads site (meta) data from SB into R

• get_meta_metadata - get info about site (meta) data

• list_tses - get a list of tses for a site on SB

• get_ts - loads data from SB into R

• get_ts_metadata - get info about ts data

Exporting data from R to text

• export_data - export data from R into a text file

• view_file - open a file in your system's default app

• view_folder - open a folder in your file explorer

Reading models from ScienceBase

• get_config - get a config file from SB

• get_metab_model - get a metab_model object from SB

Other actions for ScienceBase

• upload_presentation - upload a presentation to the Presentations folder on SB

• upload_publication - upload a presentation to the Publications folder on SB

USGS-R/powstreams documentation built on June 3, 2023, 8:58 a.m.