HapMap_ASW_MXL_KINGmat: Matrix of Pairwise Kinship Coefficient Estimates for the...
In UW-GAC/GENESIS: GENetic EStimation and Inference in Structured samples (GENESIS): Statistical methods for analyzing genetic data from samples with population structure and/or relatedness
HapMap_ASW_MXL_KINGmat R Documentation
Matrix of Pairwise Kinship Coefficient Estimates for the combined HapMap ASW and MXL Sample found with the KING-robust estimator from the KING software.
Description
KING-robust kinship coefficient estimates for the combined HapMap African Americans in the Southwest U.S. (ASW) and Mexican Americans in Los Angeles (MXL) samples.
Usage
data(HapMap_ASW_MXL_KINGmat)
Format
The format is:
num [1:173, 1:173] 0 0.00157 -0.00417 0.00209 0.00172 ...
Value
A matrix of pairwise kinship coefficient estimates as calculated with KING-robust for the combined HapMap African Americans in the Southwest U.S. (ASW) and Mexican Americans in Los Angeles (MXL) samples.
Source
http://hapmap.ncbi.nlm.nih.gov/
References
International HapMap 3 Consortium. (2010). Integrating common and rare genetic variation in diverse human populations. Nature, 467(7311), 52-58.
UW-GAC/GENESIS documentation built on Nov. 9, 2024, 11:55 a.m.
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| HapMap_ASW_MXL_KINGmat | R Documentation |
Matrix of Pairwise Kinship Coefficient Estimates for the combined HapMap ASW and MXL Sample found with the KING-robust estimator from the KING software.
Description
KING-robust kinship coefficient estimates for the combined HapMap African Americans in the Southwest U.S. (ASW) and Mexican Americans in Los Angeles (MXL) samples.
Usage
data(HapMap_ASW_MXL_KINGmat)Format
The format is: num [1:173, 1:173] 0 0.00157 -0.00417 0.00209 0.00172 ...
Value
A matrix of pairwise kinship coefficient estimates as calculated with KING-robust for the combined HapMap African Americans in the Southwest U.S. (ASW) and Mexican Americans in Los Angeles (MXL) samples.
Source
http://hapmap.ncbi.nlm.nih.gov/
References
International HapMap 3 Consortium. (2010). Integrating common and rare genetic variation in diverse human populations. Nature, 467(7311), 52-58.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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