runParaRetries: Run parallel retries

In UppsalaHenrik/nmsurfaceplot: Draw OFV surface plots of NONMEM models

Description

This is a wrapper function for parallel_retries in PsN

Usage

runParaRetries(modFileName, paraRetriesCmd = "parallel_retries",
  dir = paste0("para_retries_", format(Sys.time(), "%y%m%d_%H%M%S")),
  clean = 2, threads = 100, min_retries = 1, degree = 0.1,
  slurm_partition = "standard", rawres_input = "",
  seed = format(Sys.time(), "%Y%m%d"), nm_output = NULL, wait = TRUE)

Arguments

modFileName	The model to run parallel retries on. Only one permitted.
paraRetriesCmd	Command or path used to run parallel retries. Default is "parallel_retries" which assumes the PsN directory is on the PATH.
dir	The directory to run in. Defaults to "para_retries_<date>_<time>".
clean	The PsN clean-up level. Exactly wrapping the PsN option. Defaults to 2.
threads	The number of threads to use. Exactly wrapping the PsN option. Defaults to 100.
min_retries	The number of retries to run. Exactly wrapping the PsN option. Defaults to 1 runParaRetries()

UppsalaHenrik/nmsurfaceplot documentation built on June 4, 2019, 2:02 a.m.