API for VCCRI/C3
An R package for cross-species compendium-based cell-type identification for transcriptomic profile
| Global functions | |
|---|---|
| C3 | Man page |
| add_marker_genes_into_compendium | Man page Source code |
| add_sample_into_compendium | Man page Source code |
| biomart.ID | Man page |
| c3 | Man page |
| c3-package | Man page |
| c3_display_result | Man page Source code |
| c3_params | Man page |
| c3_test | Man page Source code |
| compute_mean | Man page Source code |
| convert_compendium_to_gene_sets | Man page Source code |
| convert_geneID_to_ensemblID | Man page Source code |
| find_valid_geneID | Man page Source code |
| format_list_data | Man page Source code |
| format_matrix_data | Man page Source code |
| hawse.human.lens.data | Man page |
| hoang.mouse.lens.data | Man page |
| human.encode.data | Man page |
| human.encode.data.descriptor | Man page |
| make_ENSEMBL_symbol_map | Man page Source code |
| make_gene_expression_compendium | Man page Source code |
| make_marker_gene_compendium | Man page Source code |
| preprocess_querydata | Man page Source code |
| select_query_sample_specific_genes | Man page Source code |
