Man pages for VCCRI/C3
An R package for cross-species compendium-based cell-type identification for transcriptomic profile
| add_marker_genes_into_compendium | add_marker_genes_into_compendium |
| add_sample_into_compendium | add_sample_into_compendium |
| c3_display_result | c3_display_result |
| c3-package | C3: Cross-species compendium-based cell-type identification |
| c3_params | c3_params |
| c3_test | c3_test |
| compute_mean | compute_mean |
| convert_compendium_to_gene_sets | convert_compendium_to_gene_sets |
| convert_geneID_to_ensemblID | convert_geneID_to_ensemblID |
| find_valid_geneID | find_valid_geneID |
| format_list_data | format_list_data |
| format_matrix_data | format_matrix_data |
| hawse.human.lens.data | Hawse human lens data |
| hoang.mouse.lens.data | Hoang mouse lens data |
| human.encode.data | Human ENCODE data |
| human.encode.data.descriptor | Human ENCODE data descriptor |
| make_ENSEMBL_symbol_map | make_ENSEMBL_symbol_map |
| make_gene_expression_compendium | make_gene_expression_compendium |
| make_marker_gene_compendium | make_marker_gene_compendium |
| preprocess_querydata | preprocess_querydata |
| select_query_sample_specific_genes | select_query_sample_specific_genes |
