Files in VilainLab/methometR
methometR: Extracting methylation information from Optical Genome Maps
.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/methylationAnalysis_Step1.r
README.md
inst/extdata/Cmapdir/output/contigs/exp_refineFinal1/merged_smaps/SampContigMolecule.xmap
inst/extdata/Cmapdir/output/contigs/exp_refineFinal1/merged_smaps/SampContig_r.cmap
inst/extdata/Cmapdir/output/contigs/exp_refineFinal1/merged_smaps/SampMolecule_q.cmap
inst/extdata/Cmapdir/output/contigs/exp_refineFinal1_sv/merged_smaps/ContigRef.xmap
inst/extdata/Cmapdir/output/contigs/exp_refineFinal1_sv/merged_smaps/SampContig_q.cmap
inst/extdata/Cmapdir/output/contigs/exp_refineFinal1_sv/merged_smaps/hg19ref_r.cmap
inst/extdata/molecules.tar.gz
inst/extdata/molecules/output/contigs/exp_refineFinal1/merged_smaps/SampContigMolecule.xmap
inst/extdata/molecules/output/contigs/exp_refineFinal1/merged_smaps/SampContig_q.cmap
inst/extdata/molecules/output/contigs/exp_refineFinal1/merged_smaps/SampMolecule_r.cmap
inst/extdata/molecules/output/contigs/exp_refineFinal1_sv/merged_smaps/ContigRef.xmap
inst/extdata/molecules/output/contigs/exp_refineFinal1_sv/merged_smaps/SampContig_q.cmap
inst/extdata/molecules/output/contigs/exp_refineFinal1_sv/merged_smaps/hg19ref_r.cmap
man/contigextract.Rd
man/extracting_modifying_methLabels.Rd
man/modmolcmap.Rd
man/molMethylLoc.Rd
man/molMethylRefLoc.Rd
man/molNickLoc.Rd
man/nickReference.Rd
man/readingCmap.Rd
man/readingXmap.Rd
man/untaringdirectoy.Rd
methometR.Rproj
vignettes/methometR.Rmd
