RNAseqcombine: Combining the RNAseq reads of family members in a single...

View source: R/RNASEQ_Analysis_Duo_Trio_SVMerge_SE.r

RNAseqcombineR Documentation

Combining the RNAseq reads of family members in a single file.

Description

Combining the RNAseq reads of family members in a single file.

Usage

RNAseqcombine(
  RNASeqDir,
  returnMethod = c("Text", "dataFrame"),
  outpath = "",
  outFileName = ""
)

Arguments

RNASeqDir

character. Directory containing RNAseq reads.

returnMethod

character. Method of returning Data.

outpath

character. Contains file path if Method of return is chosen as Text.

outFileName

character. Output file name.

Value

Text or Dataframe containing TPM read counts of genes in the family.

Examples

## Not run: 
RNASeqDir = system.file("extdata", package="nanotatoR")
returnMethod="dataFrame"
datRNASeq <- RNAseqcombine(RNASeqDir = RNASeqDir,
returnMethod = returnMethod)

## End(Not run)

VilainLab/nanotatoR documentation built on Aug. 3, 2024, 12:46 a.m.