Description Usage Arguments Value Examples
View source: R/OverlappingGenes.r
Reads BED files to produce bionano Bed files
1 2 3 4 5 6 | buildrunBNBedFiles(
bedFile,
returnMethod = c("Text", "dataFrame"),
outdir,
fname
)
|
bedFile |
character. Path to UCSC Bed File. |
returnMethod |
character. Path to output directory. |
outdir |
character. Path to output directory. |
fname |
character. Output File name. |
Data Frame or text file. Contains the gene information.
1 2 3 | bedFile <- system.file("extdata", "HomoSapienGRCH19_lift37.bed",
package="nanotatoR")
bed<-buildrunBNBedFiles(bedFile,returnMethod="dataFrame")
|
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