Files in Vitek-Lab/MSstatsTMTPTM
Post Translational Modification (PTM) Significance Analysis in shotgun mass spectrometry-based proteomic experiments with tandem mass tag (TMT) labeling
.Rbuildignore
.github/CONTRIBUTING.md
.gitignore
.travis.yml
DESCRIPTION
NAMESPACE
R/MSstatsTMTPTM.R
R/RcppExports.R
R/dataDoc.R
R/dataProcessPlotsTMTPTM.R
R/groupComparisonTMTPTM.R
R/msstatsptm-package.R
R/msstatstmtptm-package.R
README.md
codecov.yml
data/example.contrast.matrix.rda
data/model.results.contrast.rda
data/model.results.pairwise.rda
data/quant.msstats.protein.rda
data/quant.msstats.ptm.rda
data/raw.protein.rda
data/raw.ptm.rda
inst/NEWS.Rd
man/MSstatsTMTPTM.Rd
man/dataProcessPlotsTMTPTM.Rd
man/example.contrast.matrix.Rd
man/groupComparisonTMTPTM.Rd
man/model.results.contrast.Rd
man/model.results.pairwise.Rd
man/quant.msstats.protein.Rd
man/quant.msstats.ptm.Rd
man/raw.protein.Rd
man/raw.ptm.Rd
src/.gitignore
src/RcppExports.cpp
src/model_adjust.cpp
tests/testthat.R
tests/testthat/test-dataProcessPlotsTMTPTM.R
tests/testthat/test-groupComparisonTMTPTM.R
vignettes/MSstatsTMTPTM.Rmd
vignettes/MSstatsTMTPTM.Workflow.rmd
