Description Usage Arguments Value
use MSIQ to quantify transcript expression from multiple samples
1 |
D |
An integer specifying the number of RNA-seq sample supplied |
gtf_path |
A character specifying the full path of the .gtf file |
bam_path |
A character vector. Each element gives the full path of one .bam file. |
A |
An integer specifying the first parameter used the Beta prior. Default is 5. |
B |
An integer specifying the second parameter used the Beta prior. Default is 2. |
ncores |
An integer denoting the number of cores used for parallel computation. |
Save the estimation results to a text file transcript_summary.txt.
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