Clean_Sigma: Clean_Sigma function

In WJL-NCSU/Rnets: Resistance Relationship Networks using Graphical LASSO

Description

Primarily a convenience function, Clean_Sigma estimates a correlation (Sigma) matrix that may contain substantial amounts of missing data and returns it in an easily usable form for the glasso function.

Usage

Clean_Sigma(x, cor_method = "s", cor_pairing = "pair")

Arguments

x	Rhe data used to estimate the correlation matrix. Pairwise correlations between all columns are estimated.
cor_method	Method used to estimate correlations. Defaults to Spearman's method. See help file for 'cor' function.
cor_pairing	Method used to determine how NA entries are handled. See help file for 'cor' function.

WJL-NCSU/Rnets documentation built on May 31, 2021, 3:11 p.m.