NARMS_EC_DATA: E. coli Isolate information from Nat'l Antimicrobial...
In WJL-NCSU/Rnets: Resistance Relationship Networks using Graphical LASSO
Description
Usage
Format
Source
Description
A dataset of isolate resistance and metadata for 14,418 E. coli isolates from commercial chicken breasts and chicken carcasses rinsates. Resistance data stored log2 transformed minimum inhibitory concentration (MIC). Columns beyond SAMPLE_ID, Year, and SOURCE are log2(MICs). See source for key for antimicrobials.
Usage
1
Format
A dataframe from with 14,418 rows and 28 columns
- SAMPLE_ID
NARMS-assigned isolate code
- Year
Year collected
- SOURCE
Source of isolate: Retail (chicken breasts) or Slaughter (carcass rinsates)
- AMC - TIO
log2(MIC) of respective antibiotics (see source for drug codes)
Source
WJL-NCSU/Rnets documentation built on May 31, 2021, 3:11 p.m.
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Description Usage Format Source
Description
A dataset of isolate resistance and metadata for 14,418 E. coli isolates from commercial chicken breasts and chicken carcasses rinsates. Resistance data stored log2 transformed minimum inhibitory concentration (MIC). Columns beyond SAMPLE_ID, Year, and SOURCE are log2(MICs). See source for key for antimicrobials.
Usage
1 |
Format
A dataframe from with 14,418 rows and 28 columns
- SAMPLE_ID
NARMS-assigned isolate code
- Year
Year collected
- SOURCE
Source of isolate: Retail (chicken breasts) or Slaughter (carcass rinsates)
- AMC - TIO
log2(MIC) of respective antibiotics (see source for drug codes)
Source
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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