pubMedSearch: return cleaned abstracts from pubmed from searched key words
In WMBEdmands/compMS2Miner: an automatable metabolite identification, visualization and data-sharing R package for high-resolution LC-MS datasets
Description
Usage
Arguments
Value
See Also
Description
return cleaned abstracts from pubmed from searched key words
Usage
1
pubMedSearch(keys = NULL, n = 500, maxChar = 50, ...)
Arguments
keys
character vector of compound names to search pubmed with
n
numeric maximum number of results to return. The maximum and default is 500.
maxChar
numeric maximum number of characters in cleaned abstract words to return.
...
further arguments to the cleanAbstracts function.
Value
a list containing 3 named elements:
1. titles character vector of Abstract title(s)
2. abs character vector of abstract text(s).
3. clAbs clean abstract word frequency data.frame with column names 'word' and 'freq'.
See Also
PubMedWordcloud, getAbstracts, cleanAbstracts.
WMBEdmands/compMS2Miner documentation built on May 9, 2019, 10:04 p.m.
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Description Usage Arguments Value See Also
Description
return cleaned abstracts from pubmed from searched key words
Usage
1 | pubMedSearch(keys = NULL, n = 500, maxChar = 50, ...)
|
Arguments
keys |
character vector of compound names to search pubmed with |
n |
numeric maximum number of results to return. The maximum and default is 500. |
maxChar |
numeric maximum number of characters in cleaned abstract words to return. |
... |
further arguments to the |
Value
a list containing 3 named elements: 1. titles character vector of Abstract title(s) 2. abs character vector of abstract text(s). 3. clAbs clean abstract word frequency data.frame with column names 'word' and 'freq'.
See Also
PubMedWordcloud, getAbstracts, cleanAbstracts.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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