publishApp: Publish your compMS2Explorer app on shinyapps.io

In WMBEdmands/compMS2Miner: an automatable metabolite identification, visualization and data-sharing R package for high-resolution LC-MS datasets

Description

you must hold a shinyapps.io account and have a token. use this command from the package rsconnect to set up your token setAccountInfo(name='your_shinyapps.io_user_name', token='your_token', secret='your_secret') Following this the app can be deployed on your account

Usage

publishApp(object, appName = NULL, writeDir = NULL, addFiles = NULL, ...)

Arguments

object	a compMS2 class object
appName	character name for your new app (e.g. 'compMS2Example').
writeDir	character full path to a directory to save the compMS2 results and the current shiny app zip file to. This zip file can then be shared with others.if this argument is not supplied the results will be deployed on shinyapps.io.
addFiles	character vector of full paths to files which will be included in the zip file or bundle to shinyapps.io. For example code used to generate compMS2 results. The default is to include at minimum a text file containing the output of sessionInfo this is intended to maintain reproducibility of published results.
...	further arguments to the deployApp function

WMBEdmands/compMS2Miner documentation built on May 9, 2019, 10:04 p.m.