pval_plot: Prepare significant p-values for plotting
In Waller-SUSAN/gateR: Flow/Mass Cytometry Gating via Spatial Kernel Density Estimation
pval_plot R Documentation
Prepare significant p-values for plotting
Description
Internal function to convert an object of class 'im' to values readable by image.plot function within the rrs, lotrrs, and gating functions.
Usage
pval_plot(input, alpha)
Arguments
input
An object of class 'rrs' from the rrs or lotrrs function.
alpha
Numeric. The two-tailed alpha level for significance threshold (default in rrs, lotrrs, and gating functions is 0.05).
Value
An object of class 'SpatRaster' with categorical values:
A value of 1: Significant numerator.
A value of 2: Insignificant.
A value of 3: Significant denominator.
Waller-SUSAN/gateR documentation built on Feb. 5, 2024, 12:54 p.m.
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| pval_plot | R Documentation |
Prepare significant p-values for plotting
Description
Internal function to convert an object of class 'im' to values readable by image.plot function within the rrs, lotrrs, and gating functions.
Usage
pval_plot(input, alpha)
Arguments
input |
An object of class 'rrs' from the |
alpha |
Numeric. The two-tailed alpha level for significance threshold (default in |
Value
An object of class 'SpatRaster' with categorical values:
A value of 1: Significant numerator.
A value of 2: Insignificant.
A value of 3: Significant denominator.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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