plot_compounds: Plot compound time curves
In Waschina/Eutropia: Agent-based modelling of microbial communities in time and continuous µ-meter-scale space
plot_compounds R Documentation
Plot compound time curves
Description
Plot concentrations of metabolites over time
Usage
plot_compounds(object, compounds = NULL, tlim = NULL, ylim = NULL)
Arguments
object
S4-object of class growthSimulation.
compounds
Vector of compound IDs whose concentration is plotted. If no IDs are provided,
the top variable (SD) compounds are plotted (max. 8 compounds).
tlim
Numeric vector of length 2, specifying the x-range (Time) to be displayed.
ylim
Numeric vector of length 2, specifying the y-range (mM) to be displayed.
Value
A ggplot.
Waschina/Eutropia documentation built on Jan. 4, 2023, 12:42 p.m.
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| plot_compounds | R Documentation |
Plot compound time curves
Description
Plot concentrations of metabolites over time
Usage
plot_compounds(object, compounds = NULL, tlim = NULL, ylim = NULL)
Arguments
object |
S4-object of class growthSimulation. |
compounds |
Vector of compound IDs whose concentration is plotted. If no IDs are provided, the top variable (SD) compounds are plotted (max. 8 compounds). |
tlim |
Numeric vector of length 2, specifying the x-range (Time) to be displayed. |
ylim |
Numeric vector of length 2, specifying the y-range (mM) to be displayed. |
Value
A ggplot.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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