API for Winnie09/Lamian
a statistical framework for differential pseudotime analysis in multiple single-cell RNA-seq samples
| Global functions | |
|---|---|
| AreaUnderSensFdr | Source code |
| GOEnrich | Source code |
| SensFdr | Source code |
| branchPropTest | Source code |
| cellPropTest | Source code |
| clusterGene | Source code |
| cluster_gene | Source code |
| evaluate_uncertainty | Source code |
| findbranch | Source code |
| fitfunc | Source code |
| fitfunc_h5 | Source code |
| fitpt | Source code |
| fitpt.m0 | Source code |
| fitpt_h5 | Source code |
| fitpt_m0_h5 | Source code |
| getCovariateGroupDiff | Source code |
| getPopulationFit | Source code |
| getXDEType | Source code |
| get_binary | Source code |
| infer_tree_structure | Source code |
| lamian_test | Source code |
| lamian_test_h5 | Source code |
| mykmeans | Source code |
| plotClusterDiff | Source code |
| plotClusterMean | Source code |
| plotClusterMeanAndDiff | Source code |
| plotGOEnrich | Source code |
| plotGene | Source code |
| plotGeneCellAndPopulation | Source code |
| plotGenePopulation | Source code |
| plotTDEHm | Source code |
| plotXDEHm | Source code |
| predict_fitting | Source code |
| saveh5 | Source code |
| scalematrix | Source code |
