Files in Winnie09/Lamian
a statistical framework for differential pseudotime analysis in multiple single-cell RNA-seq samples
.DS_Store
DESCRIPTION
NAMESPACE
R/AreaUnderSensFdr.R
R/GOEnrich.R
R/SensFdr.R
R/branchPropTest.R
R/cellPropTest.R
R/clusterGene.R
R/cluster_gene.R
R/evaluate_uncertainty.R
R/findbranch.R
R/fitfunc.R
R/fitfunc_h5.R
R/fitpt.R
R/fitpt.m0.R
R/fitpt_h5.R
R/fitpt_m0_h5.R
R/getCovariateGroupDiff.R
R/getPopulationFit.R
R/getXDEType.R
R/get_binary.R
R/infer_tree_structure.R
R/lamian_test.R
R/lamian_test_h5.R
R/mykmeans.R
R/plotClusterDiff.R
R/plotClusterMean.R
R/plotClusterMeanAndDiff.R
R/plotGOEnrich.R
R/plotGene.R
R/plotGeneCellAndPopulation.R
R/plotGenePopulation.R
R/plotTDEHm.R
R/plotXDEHm.R
R/plotmclust.R
R/predict_fitting.R
R/saveh5.R
R/scalematrix.R
README.md
build/vignette.rds
data/datalist
data/expdata.rda
data/man_tree_data.rda
data/man_tree_res.rda
data/mandata.rda
data/mantestobj.rda
data/multi.h5
data/slingshot_data.rda
inst/NEWS
inst/doc/Lamian.R
inst/doc/Lamian.Rmd
inst/doc/Lamian.html
inst/doc/Lamian.pdf
man/AreaUnderSensFdr.Rd
man/GOEnrich.Rd
man/SensFdr.Rd
man/branchPropTest.Rd
man/cellPropTest.Rd
man/clusterGene.Rd
man/cluster_gene.Rd
man/evaluate_uncertainty.Rd
man/expdata.rda.Rd
man/findbranch.Rd
man/fitfunc.Rd
man/fitfunc_h5.Rd
man/fitpt.Rd
man/fitpt.m0.Rd
man/fitpt_h5.Rd
man/fitpt_m0_h5.Rd
man/getCovariateGroupDiff.Rd
man/getPopulationFit.Rd
man/getXDEType.Rd
man/get_binary.Rd
man/infer_tree_structure.Rd
man/lamian_test.Rd
man/lamian_test_h5.Rd
man/man_tree_data.rda.Rd
man/man_tree_res.rda.Rd
man/mandata.rda.Rd
man/mantestobj.rda.Rd
man/mykmeans.Rd
man/plotClusterDiff.Rd
man/plotClusterMean.Rd
man/plotClusterMeanAndDiff.Rd
man/plotGOEnrich.Rd
man/plotGene.Rd
man/plotGeneCellAndPopulation.Rd
man/plotGenePopulation.Rd
man/plotTDEHm.Rd
man/plotXDEHm.Rd
man/plotmclust.Rd
man/predict_fitting.Rd
man/saveh5.Rd
man/scalematrix.Rd
vignettes/Lamian.Rmd
vignettes/Lamian.html
vignettes/figure1.jpeg
vignettes/lamian.jpeg
vignettes/logo.png
