Files in Winnie09/Lamian
a statistical framework for differential pseudotime analysis in multiple single-cell RNA-seq samples

.DS_Store
DESCRIPTION
NAMESPACE
R/AreaUnderSensFdr.R R/GOEnrich.R R/SensFdr.R R/branchPropTest.R R/cellPropTest.R R/clusterGene.R R/cluster_gene.R R/evaluate_uncertainty.R R/findbranch.R R/fitfunc.R R/fitfunc_h5.R R/fitpt.R R/fitpt.m0.R R/fitpt_h5.R R/fitpt_m0_h5.R R/getCovariateGroupDiff.R R/getPopulationFit.R R/getXDEType.R R/get_binary.R R/infer_tree_structure.R R/lamian_test.R R/lamian_test_h5.R R/mykmeans.R R/plotClusterDiff.R R/plotClusterMean.R R/plotClusterMeanAndDiff.R R/plotGOEnrich.R R/plotGene.R R/plotGeneCellAndPopulation.R R/plotGenePopulation.R R/plotTDEHm.R R/plotXDEHm.R R/plotmclust.R R/predict_fitting.R R/saveh5.R R/scalematrix.R README.md
build/vignette.rds
data/datalist
data/expdata.rda
data/man_tree_data.rda
data/man_tree_res.rda
data/mandata.rda
data/mantestobj.rda
data/multi.h5
data/slingshot_data.rda
inst/NEWS
inst/doc/Lamian.R inst/doc/Lamian.Rmd
inst/doc/Lamian.html
inst/doc/Lamian.pdf
man/AreaUnderSensFdr.Rd
man/GOEnrich.Rd
man/SensFdr.Rd
man/branchPropTest.Rd
man/cellPropTest.Rd
man/clusterGene.Rd
man/cluster_gene.Rd
man/evaluate_uncertainty.Rd
man/expdata.rda.Rd
man/findbranch.Rd
man/fitfunc.Rd
man/fitfunc_h5.Rd
man/fitpt.Rd
man/fitpt.m0.Rd
man/fitpt_h5.Rd
man/fitpt_m0_h5.Rd
man/getCovariateGroupDiff.Rd
man/getPopulationFit.Rd
man/getXDEType.Rd
man/get_binary.Rd
man/infer_tree_structure.Rd
man/lamian_test.Rd
man/lamian_test_h5.Rd
man/man_tree_data.rda.Rd
man/man_tree_res.rda.Rd
man/mandata.rda.Rd
man/mantestobj.rda.Rd
man/mykmeans.Rd
man/plotClusterDiff.Rd
man/plotClusterMean.Rd
man/plotClusterMeanAndDiff.Rd
man/plotGOEnrich.Rd
man/plotGene.Rd
man/plotGeneCellAndPopulation.Rd
man/plotGenePopulation.Rd
man/plotTDEHm.Rd
man/plotXDEHm.Rd
man/plotmclust.Rd
man/predict_fitting.Rd
man/saveh5.Rd
man/scalematrix.Rd
vignettes/Lamian.Rmd
vignettes/Lamian.html
vignettes/figure1.jpeg
vignettes/lamian.jpeg
vignettes/logo.png
Winnie09/Lamian documentation built on Dec. 19, 2024, 10:28 p.m.