fetch_cells: Find the overlapped genes of gene sets defined by different...

In YinanZhang522/SIEVE: identify SIngle-cEll Variable gEnes for single-cell RNA sequencing data

Description

Find the overlapped genes of gene sets defined by different method.

Usage

fetch_cells(expr,ratio=0.7,n=50)

Arguments

expr	The expression dataframe. Rows should be genes and columns should be cells.
ratio	the Proportion of cell subset.The default value of ratio is set to 0.7, but can also be set to other values between 0 to 1.
n	The times of subsampling.The default value of n is set to 50.

Value

A list of random cell subsets.

Examples

celllist<-fetch_cells(expr,ratio=0.7,n=50)

YinanZhang522/SIEVE documentation built on March 27, 2021, 9:12 a.m.