viewClade: viewClade
In YuLab-SMU/ggtree: an R package for visualization of tree and annotation data
View source: R/clade-functions.R
viewClade R Documentation
viewClade
Description
view a selected clade of tree, clade can be selected by specifying a node number or
determined by the most recent common ancestor of selected tips
Usage
viewClade(tree_view = NULL, node, xmax_adjust = 0)
Arguments
tree_view
tree view (i.e. the ggtree object). If tree_view is NULL, the last ggplot object will be used.
node
internal node number to specify a clade. If NULL, using the whole tree
xmax_adjust
adjust the max range of x axis
Value
clade plot
Author(s)
Guangchuang Yu
Examples
x <- rtree(15)
p <- ggtree(x) + geom_tiplab()
viewClade(p, 18, xmax_adjust = 0.)
YuLab-SMU/ggtree documentation built on Nov. 3, 2024, 4:15 p.m.
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View source: R/clade-functions.R
| viewClade | R Documentation |
viewClade
Description
view a selected clade of tree, clade can be selected by specifying a node number or determined by the most recent common ancestor of selected tips
Usage
viewClade(tree_view = NULL, node, xmax_adjust = 0)
Arguments
tree_view |
tree view (i.e. the ggtree object). If tree_view is NULL, the last ggplot object will be used. |
node |
internal node number to specify a clade. If NULL, using the whole tree |
xmax_adjust |
adjust the max range of x axis |
Value
clade plot
Author(s)
Guangchuang Yu
Examples
x <- rtree(15)
p <- ggtree(x) + geom_tiplab()
viewClade(p, 18, xmax_adjust = 0.)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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