inst/examples/plot_summary_help.R

In ZHG2017/Rcpp-packageGen3sis: General Engine for Eco-Evolutionary Simulations

# load existing summary example
datapath <- system.file(file.path("extdata", "WorldCenter"), package = "gen3sis")
output <- readRDS(file.path(datapath, "output/config_worldcenter/sgen3sis.rds"))
# plot output summary
plot_summary(output)

plot_summary(output, summary_title="Example")

\donttest{
## run simulation and plot summary
# get path or correct input objects
datapath <- system.file(file.path("extdata", "CaseStudy1"), package="gen3sis")
# run simulation and store summary object to output
output <- run_simulation(config = file.path(datapath,"config/config_fast.R"), 
                      landscape = file.path(datapath,"landscape"),
                      output_directory = tempdir())
# plot output summary
plot_summary(output)
}