| exomePeak2_hg19 | Produce code for Peak Calling with exomePeak2 |
| exomePeak2_PC | Produce code for Peak Calling with exomePeak2 |
| guitar_plot | Produce code for guitar plot |
| guitar_plot_Meth | Produce code for guitar plot after refined methylation call. |
| hello | Hello, World! |
| introduce_arg | Introduce argument into a code chunk. |
| OneStep_PRC | Generate precision recall curve and related statistics... |
| OneStep_PRC_Mayer | Generate precision recall curve and related statistics... |
| parallel_peak_calling | Run peak callings in parallel on bash sever |
| parallel_report | Run reports on peak callings in parallel with bash sever. |
| PRC_df | Generate data.frame for the precision recall curve. |
| reads_GC_plot | Produce code for gc content plot. |
| Rnohup | submit a bash commands on server background |
| write_macs2_code | Write code for macs2 (only for auprc purpose). |
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