gsea: permutation test based gene set enrichment analysis given...
In ZhenWei10/golite: Fast and simple GOEA
Usage
1
gsea(freq_gs, freq_bg, gs_total_gene, bg_total_gene, adj_method, ease)
Arguments
freq_gs
The named vector of term frequencies in gene set.
freq_bg
The named vector of term frequencies in background.
gs_total_gene
Total gene number in gene set.
bg_total_gene
Total gene number in back ground.
adj_method
the p adjust method.
ease
To calculate EASE score or not.
ZhenWei10/golite documentation built on May 30, 2019, 6:15 p.m.
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Usage
1 | gsea(freq_gs, freq_bg, gs_total_gene, bg_total_gene, adj_method, ease)
|
Arguments
freq_gs |
The named vector of term frequencies in gene set. |
freq_bg |
The named vector of term frequencies in background. |
gs_total_gene |
Total gene number in gene set. |
bg_total_gene |
Total gene number in back ground. |
adj_method |
the p adjust method. |
ease |
To calculate EASE score or not. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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