Files in ZhuMSLab/MetDNA
MetDNA
.RData
.Rbuildignore
.Rhistory
DESCRIPTION
LICENSE
NAMESPACE
NEWS
R/IdentifyFeature.R
R/analysisData.R
R/analysisGeneration.R
R/checkData.R
R/figure.R
R/gseAnalysis.R
R/isotopeAdductMetaboliteAnnotation.R
R/metABM.R
R/metEnrichment.R
R/metModule.R
R/metPathway.R
R/metPathway2.R
R/metStat.R
R/metTransform.R
R/metdnaFor2Mode.R
R/metdnaForOneMode.R
R/moduleClass.R
R/ms2Annotation.R
R/mseAnalysis.R
R/pathifer.R
R/peakClass.R
R/processTags2.R
R/readAnnotation.R
R/rtPrediction.R
R/singleTransform.R
R/tools.R
README.md
_config.yml
angular/.angular-cli.json
angular/.editorconfig
angular/.gitignore
angular/README.md
angular/e2e/app.e2e-spec.ts
angular/e2e/app.po.ts
angular/e2e/tsconfig.e2e.json
angular/karma.conf.js
angular/package-lock.json
angular/package.json
angular/protractor.conf.js
angular/src/app/_components/analysis-data-format/analysis-data-format.component.css
angular/src/app/_components/analysis-data-format/analysis-data-format.component.html
angular/src/app/_components/analysis-data-format/analysis-data-format.component.spec.ts
angular/src/app/_components/analysis-data-format/analysis-data-format.component.ts
angular/src/app/_components/analysis-para-setting/analysis-para-setting.component.css
angular/src/app/_components/analysis-para-setting/analysis-para-setting.component.html
angular/src/app/_components/analysis-para-setting/analysis-para-setting.component.spec.ts
angular/src/app/_components/analysis-para-setting/analysis-para-setting.component.ts
angular/src/app/_components/analysis/analysis.component.css
angular/src/app/_components/analysis/analysis.component.html
angular/src/app/_components/analysis/analysis.component.spec.ts
angular/src/app/_components/analysis/analysis.component.ts
angular/src/app/_components/demo/demo.component.css
angular/src/app/_components/demo/demo.component.html
angular/src/app/_components/demo/demo.component.spec.ts
angular/src/app/_components/demo/demo.component.ts
angular/src/app/_components/faq/faq.component.css
angular/src/app/_components/faq/faq.component.html
angular/src/app/_components/faq/faq.component.spec.ts
angular/src/app/_components/faq/faq.component.ts
angular/src/app/_components/file-upload/file-upload.component.css
angular/src/app/_components/file-upload/file-upload.component.html
angular/src/app/_components/file-upload/file-upload.component.spec.ts
angular/src/app/_components/file-upload/file-upload.component.ts
angular/src/app/_components/help/help.component.css
angular/src/app/_components/help/help.component.html
angular/src/app/_components/help/help.component.spec.ts
angular/src/app/_components/help/help.component.ts
angular/src/app/_components/index.ts
angular/src/app/_components/introduction/introduction.component.css
angular/src/app/_components/introduction/introduction.component.html
angular/src/app/_components/introduction/introduction.component.spec.ts
angular/src/app/_components/introduction/introduction.component.ts
angular/src/app/_components/log-in/log-in.component.css
angular/src/app/_components/log-in/log-in.component.html
angular/src/app/_components/log-in/log-in.component.spec.ts
angular/src/app/_components/log-in/log-in.component.ts
angular/src/app/_data_model/django-api.ts
angular/src/app/_data_model/index.ts
angular/src/app/_data_model/paras.ts
angular/src/app/_data_model/project.ts
angular/src/app/_data_model/uploadfile.ts
angular/src/app/_data_model/user.ts
angular/src/app/_modules/app-routing.module.ts
angular/src/app/_modules/index.ts
angular/src/app/_service/authentication.service.spec.ts
angular/src/app/_service/authentication.service.ts
angular/src/app/_service/file.service.spec.ts
angular/src/app/_service/file.service.ts
angular/src/app/_service/index.ts
angular/src/app/_service/parameter.service.spec.ts
angular/src/app/_service/parameter.service.ts
angular/src/app/_service/project.service.spec.ts
angular/src/app/_service/project.service.ts
angular/src/app/_service/user.service.spec.ts
angular/src/app/_service/user.service.ts
angular/src/app/app.component.css
angular/src/app/app.component.html
angular/src/app/app.component.spec.ts
angular/src/app/app.component.ts
angular/src/app/app.module.ts
angular/src/app/validate-project-name.directive.spec.ts
angular/src/app/validate-project-name.directive.ts
angular/src/assets/.gitkeep
angular/src/assets/Dual-Ring.gif
angular/src/assets/Flickr.gif
angular/src/assets/MetDNA-logo.png
angular/src/assets/demo-data-structure.png
angular/src/assets/favicon-new.ico
angular/src/assets/help/help-add-fig1-MS-DIAL.png
angular/src/assets/help/help-add-fig2-MS-DIAL-msp.png
angular/src/assets/help/help-fig1-proteowizard.png
angular/src/assets/help/help-fig10-submit.png
angular/src/assets/help/help-fig11-email.png
angular/src/assets/help/help-fig12-result-folder.png
angular/src/assets/help/help-fig13-result-analysis-report.png
angular/src/assets/help/help-fig14-result-pathway.png
angular/src/assets/help/help-fig2-peaktable.png
angular/src/assets/help/help-fig3-msconvert.png
angular/src/assets/help/help-fig4-sample-info.png
angular/src/assets/help/help-fig5-sample-name.png
angular/src/assets/help/help-fig7-login.png
angular/src/assets/help/help-fig8-upload.png
angular/src/assets/help/help-fig9-parameter-setting.png
angular/src/assets/ms1_format.png
angular/src/assets/sample_info_format.png
angular/src/assets/workflow.png
angular/src/assets/zhulab-mini.png
angular/src/environments/environment.prod.ts
angular/src/environments/environment.ts
angular/src/favicon.png
angular/src/index.html
angular/src/main.ts
angular/src/polyfills.ts
angular/src/styles.css
angular/src/test.ts
angular/src/tsconfig.app.json
angular/src/tsconfig.spec.json
angular/src/typings.d.ts
angular/tsconfig.json
angular/tslint.json
data/adduct.table.hilic.rda
data/adduct.table.rp.rda
data/ath.gene.kegg.pathway.rda
data/ath.kegg.pathway.rda
data/bta.gene.kegg.pathway.rda
data/bta.kegg.pathway.rda
data/cel.gene.kegg.pathway.rda
data/cel.kegg.pathway.rda
data/dme.gene.kegg.pathway.rda
data/dme.kegg.pathway.rda
data/dre.gene.kegg.pathway.rda
data/dre.kegg.pathway.rda
data/eco.gene.kegg.pathway.rda
data/eco.kegg.pathway.rda
data/gga.gene.kegg.pathway.rda
data/gga.kegg.pathway.rda
data/hilic.neg.rda
data/hilic.pos.rda
data/hsa.gene.kegg.pathway.rda
data/hsa.kegg.pathway.rda
data/kegg.adduct.neg.rda
data/kegg.adduct.pos.rda
data/kegg.adduct.rda
data/kegg.compound.md.rda
data/kegg.compound.rda
data/kegg.pathway.rda
data/kegg.rpair2.rda
data/mmu.gene.kegg.pathway.rda
data/mmu.kegg.pathway.rda
data/orbitrapMetlib.rda
data/pfa.gene.kegg.pathway.rda
data/pfa.kegg.pathway.rda
data/ppu.gene.kegg.pathway.rda
data/ppu.kegg.pathway.rda
data/rat.gene.kegg.pathway.rda
data/rat.kegg.pathway.rda
data/rp.neg.rda
data/rp.pos.rda
data/sce.gene.kegg.pathway.rda
data/sce.kegg.pathway.rda
data/smm.gene.kegg.pathway.rda
data/smm.kegg.pathway.rda
data/syf.gene.kegg.pathway.rda
data/syf.kegg.pathway.rda
data/tbr.gene.kegg.pathway.rda
data/tbr.kegg.pathway.rda
inst/doc/MetDNA.instruction.Rmd
inst/doc/MetDNA.instruction.html
inst/rmarkdowm/templates/anlysis_Report/skeleton/analysis.report.Rmd
inst/rmarkdowm/templates/anlysis_Report/skeleton/logo.png
man/GetDiffMZppm.Rd
man/GetDotProduct.Rd
man/GetMatchResult.Rd
man/GetSpec2Match.Rd
man/GetWeightedInt.Rd
man/IdentifyFeature.Rd
man/MatchFromTemp.Rd
man/MatchSpec.Rd
man/MetDNA.Rd
man/adductAnnotation.Rd
man/analysisGeneration.Rd
man/checkData.Rd
man/checkElement.Rd
man/compareAnnotation.Rd
man/equalPeakinfo.Rd
man/equalPeakinfo1.Rd
man/foldChange.Rd
man/getNeighbor.Rd
man/gseAnalysis.Rd
man/memoryList.Rd
man/metABM.Rd
man/metAnnotation.Rd
man/metEnrichment.Rd
man/metModule.Rd
man/metPathway.Rd
man/metPathway2.Rd
man/moduleplot.Rd
man/ms2Annotation.Rd
man/mseAnalysis.Rd
man/pasteElement.Rd
man/peakInfo-Class.Rd
man/readAnnotation.Rd
man/removeIsotope.Rd
man/sendMail.Rd
man/showTags2.Rd
man/splitFormula.Rd
man/sumFormula.Rd
man/tags2Match.Rd
man/tags2Result.Rd
man/uniTest.Rd
man/zipData.Rd
python/.gitignore
python/README.md
python/manage.py
python/metDNA/__init__.py
python/metDNA/settings.py
python/metDNA/static/static_dirs/img/logo-mini.png
python/metDNA/static/static_dirs/img/zhulab_mini_logo.png
python/metDNA/static/static_root/admin/css/base.css
python/metDNA/static/static_root/admin/css/changelists.css
python/metDNA/static/static_root/admin/css/dashboard.css
python/metDNA/static/static_root/admin/css/fonts.css
python/metDNA/static/static_root/admin/css/forms.css
python/metDNA/static/static_root/admin/css/login.css
python/metDNA/static/static_root/admin/css/rtl.css
python/metDNA/static/static_root/admin/css/widgets.css
python/metDNA/static/static_root/admin/fonts/LICENSE.txt
python/metDNA/static/static_root/admin/fonts/README.txt
python/metDNA/static/static_root/admin/fonts/Roboto-Bold-webfont.woff
python/metDNA/static/static_root/admin/fonts/Roboto-Light-webfont.woff
python/metDNA/static/static_root/admin/fonts/Roboto-Regular-webfont.woff
python/metDNA/static/static_root/admin/img/LICENSE
python/metDNA/static/static_root/admin/img/README.txt
python/metDNA/static/static_root/admin/img/calendar-icons.svg
python/metDNA/static/static_root/admin/img/gis/move_vertex_off.svg
python/metDNA/static/static_root/admin/img/gis/move_vertex_on.svg
python/metDNA/static/static_root/admin/img/icon-addlink.svg
python/metDNA/static/static_root/admin/img/icon-alert.svg
python/metDNA/static/static_root/admin/img/icon-calendar.svg
python/metDNA/static/static_root/admin/img/icon-changelink.svg
python/metDNA/static/static_root/admin/img/icon-clock.svg
python/metDNA/static/static_root/admin/img/icon-deletelink.svg
python/metDNA/static/static_root/admin/img/icon-no.svg
python/metDNA/static/static_root/admin/img/icon-unknown-alt.svg
python/metDNA/static/static_root/admin/img/icon-unknown.svg
python/metDNA/static/static_root/admin/img/icon-yes.svg
python/metDNA/static/static_root/admin/img/inline-delete.svg
python/metDNA/static/static_root/admin/img/search.svg
python/metDNA/static/static_root/admin/img/selector-icons.svg
python/metDNA/static/static_root/admin/img/sorting-icons.svg
python/metDNA/static/static_root/admin/img/tooltag-add.svg
python/metDNA/static/static_root/admin/img/tooltag-arrowright.svg
python/metDNA/static/static_root/admin/js/SelectBox.js
python/metDNA/static/static_root/admin/js/SelectFilter2.js
python/metDNA/static/static_root/admin/js/actions.js
python/metDNA/static/static_root/admin/js/actions.min.js
python/metDNA/static/static_root/admin/js/admin/DateTimeShortcuts.js
python/metDNA/static/static_root/admin/js/admin/RelatedObjectLookups.js
python/metDNA/static/static_root/admin/js/calendar.js
python/metDNA/static/static_root/admin/js/cancel.js
python/metDNA/static/static_root/admin/js/change_form.js
python/metDNA/static/static_root/admin/js/collapse.js
python/metDNA/static/static_root/admin/js/collapse.min.js
python/metDNA/static/static_root/admin/js/core.js
python/metDNA/static/static_root/admin/js/inlines.js
python/metDNA/static/static_root/admin/js/inlines.min.js
python/metDNA/static/static_root/admin/js/jquery.init.js
python/metDNA/static/static_root/admin/js/popup_response.js
python/metDNA/static/static_root/admin/js/prepopulate.js
python/metDNA/static/static_root/admin/js/prepopulate.min.js
python/metDNA/static/static_root/admin/js/prepopulate_init.js
python/metDNA/static/static_root/admin/js/timeparse.js
python/metDNA/static/static_root/admin/js/urlify.js
python/metDNA/static/static_root/admin/js/vendor/jquery/LICENSE-JQUERY.txt
python/metDNA/static/static_root/admin/js/vendor/jquery/jquery.js
python/metDNA/static/static_root/admin/js/vendor/jquery/jquery.min.js
python/metDNA/static/static_root/admin/js/vendor/xregexp/LICENSE-XREGEXP.txt
python/metDNA/static/static_root/admin/js/vendor/xregexp/xregexp.js
python/metDNA/static/static_root/admin/js/vendor/xregexp/xregexp.min.js
python/metDNA/static/static_root/django_extensions/css/jquery.autocomplete.css
python/metDNA/static/static_root/django_extensions/img/indicator.gif
python/metDNA/static/static_root/django_extensions/js/jquery.ajaxQueue.js
python/metDNA/static/static_root/django_extensions/js/jquery.autocomplete.js
python/metDNA/static/static_root/django_extensions/js/jquery.bgiframe.js
python/metDNA/static/static_root/rest_framework/css/bootstrap-tweaks.css
python/metDNA/static/static_root/rest_framework/css/bootstrap.min.css
python/metDNA/static/static_root/rest_framework/css/default.css
python/metDNA/static/static_root/rest_framework/css/prettify.css
python/metDNA/static/static_root/rest_framework/docs/css/base.css
python/metDNA/static/static_root/rest_framework/docs/css/bootstrap-theme.min.css
python/metDNA/static/static_root/rest_framework/docs/css/bootstrap.min.css
python/metDNA/static/static_root/rest_framework/docs/css/font-awesome-4.0.3.css
python/metDNA/static/static_root/rest_framework/docs/css/highlight.css
python/metDNA/static/static_root/rest_framework/docs/css/jquery.json-view.min.css
python/metDNA/static/static_root/rest_framework/docs/fonts/fontawesome-webfont.eot
python/metDNA/static/static_root/rest_framework/docs/fonts/fontawesome-webfont.svg
python/metDNA/static/static_root/rest_framework/docs/fonts/fontawesome-webfont.ttf
python/metDNA/static/static_root/rest_framework/docs/fonts/fontawesome-webfont.woff
python/metDNA/static/static_root/rest_framework/docs/fonts/glyphicons-halflings-regular.eot
python/metDNA/static/static_root/rest_framework/docs/fonts/glyphicons-halflings-regular.svg
python/metDNA/static/static_root/rest_framework/docs/fonts/glyphicons-halflings-regular.ttf
python/metDNA/static/static_root/rest_framework/docs/fonts/glyphicons-halflings-regular.woff
python/metDNA/static/static_root/rest_framework/docs/fonts/glyphicons-halflings-regular.woff2
python/metDNA/static/static_root/rest_framework/docs/img/favicon.ico
python/metDNA/static/static_root/rest_framework/docs/img/grid.png
python/metDNA/static/static_root/rest_framework/docs/js/api.js
python/metDNA/static/static_root/rest_framework/docs/js/bootstrap.min.js
python/metDNA/static/static_root/rest_framework/docs/js/highlight.pack.js
python/metDNA/static/static_root/rest_framework/docs/js/jquery-1.10.2.min.js
python/metDNA/static/static_root/rest_framework/docs/js/jquery.json-view.min.js
python/metDNA/static/static_root/rest_framework/fonts/glyphicons-halflings-regular.eot
python/metDNA/static/static_root/rest_framework/fonts/glyphicons-halflings-regular.svg
python/metDNA/static/static_root/rest_framework/fonts/glyphicons-halflings-regular.ttf
python/metDNA/static/static_root/rest_framework/fonts/glyphicons-halflings-regular.woff
python/metDNA/static/static_root/rest_framework/fonts/glyphicons-halflings-regular.woff2
python/metDNA/static/static_root/rest_framework/img/glyphicons-halflings-white.png
python/metDNA/static/static_root/rest_framework/img/glyphicons-halflings.png
python/metDNA/static/static_root/rest_framework/img/grid.png
python/metDNA/static/static_root/rest_framework/js/ajax-form.js
python/metDNA/static/static_root/rest_framework/js/bootstrap.min.js
python/metDNA/static/static_root/rest_framework/js/coreapi-0.1.0.js
python/metDNA/static/static_root/rest_framework/js/csrf.js
python/metDNA/static/static_root/rest_framework/js/default.js
python/metDNA/static/static_root/rest_framework/js/jquery-1.12.4.min.js
python/metDNA/static/static_root/rest_framework/js/prettify-min.js
python/metDNA/urls.py
python/metDNA/wsgi.py
python/metDNACore/__init__.py
python/metDNACore/admin.py
python/metDNACore/apps.py
python/metDNACore/check_data_validity.py
python/metDNACore/migrations/0001_initial.py
python/metDNACore/migrations/0002_auto_20171017_1145.py
python/metDNACore/migrations/0003_uploadfile_sample_info.py
python/metDNACore/migrations/0004_auto_20171019_1456.py
python/metDNACore/migrations/0005_projectqueue.py
python/metDNACore/migrations/0006_auto_20171031_1646.py
python/metDNACore/migrations/0007_auto_20171115_1047.py
python/metDNACore/migrations/0008_auto_20171115_1054.py
python/metDNACore/migrations/0009_auto_20171121_0958.py
python/metDNACore/migrations/0010_auto_20171227_0224.py
python/metDNACore/migrations/0011_auto_20180130_1550.py
python/metDNACore/migrations/__init__.py
python/metDNACore/models.py
python/metDNACore/send_email.py
python/metDNACore/serializers.py
python/metDNACore/tests.py
python/metDNACore/views.py
python/public_function.py
python/requirements.txt
python/run_metDNA.py
vignettes/MetDNA.instruction.Rmd
vignettes/MetDNA.instruction.html
vignettes/rsconnect/documents/MetDNA.instruction.Rmd/rpubs.com/rpubs/Document.dcf
