analysisGeneration: analysisGeneration

In ZhuMSLab/MetDNA: MetDNA

analysisGeneration

Description

Generate analysis report

Usage

analysisGeneration(polarity = c("positive", "negative", "both"),
  pos.path = ".", neg.path = ".", data.pos = "data.csv",
  data.neg = "data.csv", sample.info = "sample.info.csv",
  output.path = ".", correct = TRUE, p.cutoff = 0.01,
  candidate.num = candidate.num, type = c("html", "pdf", "all"))

Arguments

polarity	The polarity
pos.path	The directory of positive data.
neg.path	The directory of negative data.
data.pos	The name of positive data.
data.neg	The name of negative data.
sample.info	The name of sample.info.
output.path	Output directory.
correct	Correct p value or not.
p.cutoff	P value cutoff.
candidate.num	Top candidate.num metabolites for each peak.
type	Analysis report type.

Value

Analysis report.

Author(s)

Xiaotao Shen [e-mail]

ZhuMSLab/MetDNA documentation built on March 29, 2022, 5:45 p.m.