libSBMLused.md

In a-kramer/SBtabVFGEN: Converts from SBtab to vf,mod,[sbml]

Functions from libSBML used by this package

If libSBML is installed with R bindings (i.e. libSBML exists as an R package), we use these functions to write an SBML model.

Compartment_setId
Compartment_setName
Compartment_setUnits
Compartment_setVolume
formulaToString
KineticLaw_setMath
Model_createAssignmentRule
Model_createCompartment
Model_createParameter
Model_createReaction
Model_createSpecies
Model_createUnit
Model_createUnitDefinition
Model_setId
Parameter_setId
Parameter_setName
Parameter_setUnits
Parameter_setValue
parseL3Formula
Reaction_createKineticLaw
Reaction_createProduct
Reaction_createReactant
Reaction_setId
Reaction_setName
Reaction_setReversible
readMathMLFromString
Rule_setMath
Rule_setVariable
SBMLDocument
SBMLDocument_createModel
SimpleSpeciesReference_setSpecies
Species_setBoundaryCondition
Species_setCompartment
Species_setId
Species_setInitialConcentration
Species_setName
Species_setUnits
SpeciesReference
SpeciesReference_setStoichiometry
Unit_setExponent
Unit_setKind
Unit_setMultiplier
Unit_setScale
UnitDefinition
UnitDefinition_createUnit
UnitDefinition_setId

a-kramer/SBtabVFGEN documentation built on Nov. 14, 2024, 8:41 p.m.