Jensed-Shannon/full_chromosome.R
In aaaaana/changepoints:
# experiment on full chromosome:
dat <- read.fasta(file = "../changepoints/data/chrI.fa.gz")
dat2 <- unlist(dat, use.names = FALSE)
dat2f <- as.factor(dat2)
time_study_full = system.time(results_full <- JSD_algorithm(dat2f, cutoff = 15))
saveRDS(list("time"=time_study_full, 'results' = results_full), file = "results_full.rds")
readRDS(file = "results_full.rds")
aaaaana/changepoints documentation built on May 26, 2019, 1:35 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
# experiment on full chromosome:
dat <- read.fasta(file = "../changepoints/data/chrI.fa.gz")
dat2 <- unlist(dat, use.names = FALSE)
dat2f <- as.factor(dat2)
time_study_full = system.time(results_full <- JSD_algorithm(dat2f, cutoff = 15))
saveRDS(list("time"=time_study_full, 'results' = results_full), file = "results_full.rds")
readRDS(file = "results_full.rds")
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.