Jensed-Shannon/plots_for_DNA.R
In aaaaana/changepoints:
dat <- read.fasta(file = "../changepoints/data/chrI.fa.gz")
dat2 <- unlist(dat, use.names = FALSE)
dat2f <- as.factor(dat2)[1:1500]
DNA_plot(dat2f, c(300))
perform_DNA_test(JSD_algorithm, size = 1500, cutoff=15)
cps = find_change_points_JSD(dat2f)
DNA_fractions(dat2f, cps[-1])
aaaaana/changepoints documentation built on May 26, 2019, 1:35 p.m.
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dat <- read.fasta(file = "../changepoints/data/chrI.fa.gz")
dat2 <- unlist(dat, use.names = FALSE)
dat2f <- as.factor(dat2)[1:1500]
DNA_plot(dat2f, c(300))
perform_DNA_test(JSD_algorithm, size = 1500, cutoff=15)
cps = find_change_points_JSD(dat2f)
DNA_fractions(dat2f, cps[-1])
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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