Description Usage Arguments Details Value See Also Examples
This function will choose the top modules specified by users for downstream
analyses. Sub-network can also be plotted if plot=TRUE
.
1 | chooseModule(res.list, top = 0.01, plot = FALSE)
|
res.list |
The results from function |
top |
Either a percentage (<1) or an integer (>=1) |
plot |
To plot the sub-network or not |
The parameter top
could be either a percentage (<1) or an integer
(>=1). For example, if top
is 0.01, the top 1% modules will be
chosen; if top
is 50, the top 50 modules will be chosen.
A list contains both the chosen modules and the sub-network constructed from the chosen modules.
1 2 3 4 | ## Not run:
res.list <- dms(network, geneweight, expr1, expr2)
## End(Not run)
|
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