preprocess_stamp: Preprocess raw reads using cutadapt and my little perl...
In abelew/stampr: Perform the STAMP analysis

preprocess_stamp

R Documentation

Preprocess raw reads using cutadapt and my little perl script.

Preprocess raw reads using cutadapt and my little perl script.

preprocess_stamp(
  metadata,
  raw_column = "raw_fastq",
  trimmed_column = "trimmed_fastq",
  index_column = "index_table",
  output = NULL
)

`metadata`	Sample metadata.
`column`	Metadata column containing the locations of the raw reads.

abelew/stampr documentation built on April 14, 2022, 5:03 a.m.

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