clinicalData: Get available clinical data for samples in a case list
In acidgenomics/cBioPortalAnalysis: cBioPortal Analysis Utilities
clinicalData R Documentation
Get available clinical data for samples in a case list
Description
Get available clinical data for samples in a case list
Usage
clinicalData(caseList)
Arguments
caseList
character(1).
Case list identifier (e.g. "ccle_broad_2019_sequenced").
Refer to caseLists() for details.
Value
DataFrame.
Note
Updated 2022-06-06.
See Also
-
caseLists().
-
cancerStudies().
Examples
## DLBCL TCGA ====
x <- clinicalData(caseList = "dlbc_tcga_pan_can_atlas_2018_rna_seq_v2_mrna")
print(x)
## CCLE Broad 2019 ====
x <- clinicalData(caseList = "ccle_broad_2019_sequenced")
print(x)
acidgenomics/cBioPortalAnalysis documentation built on Jan. 10, 2024, 6:29 p.m.
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| clinicalData | R Documentation |
Get available clinical data for samples in a case list
Description
Get available clinical data for samples in a case list
Usage
clinicalData(caseList)
Arguments
caseList |
|
Value
DataFrame.
Note
Updated 2022-06-06.
See Also
-
caseLists(). -
cancerStudies().
Examples
## DLBCL TCGA ====
x <- clinicalData(caseList = "dlbc_tcga_pan_can_atlas_2018_rna_seq_v2_mrna")
print(x)
## CCLE Broad 2019 ====
x <- clinicalData(caseList = "ccle_broad_2019_sequenced")
print(x)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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