API for acidgenomics/r-depmapanalysis
DepMap Analysis Utilities
| Global functions | |
|---|---|
| .cacheURL | Source code |
| .importDataFile | Source code |
| .importGeneDataFile | Source code |
| .makeCcleSE | Source code |
| .makeSummarizedExperiment | Source code |
| .mapCellsToColnames | Source code |
| CCLECopyNumberData | Man page |
| CCLECopyNumberData-class | Man page |
| CCLEExpressionData | Man page |
| CCLEExpressionData-class | Man page |
| CCLEFusionData | Man page |
| CCLEFusionData-class | Man page |
| CCLEMutationData | Man page |
| CCLEMutationData-class | Man page |
| Codependencies | Man page |
| Codependencies-class | Man page |
| GeneEffect | Man page |
| GeneEffect-class | Man page |
| crispr | Man page |
| params | Man page |
| plotGeneEffect | Man page |
| plotGeneEffect,GeneEffect-method | Man page |
| plotGeneEffectVsExpression | Man page |
| plotGeneEffectVsExpression,GeneEffect,CCLEExpressionData-method | Man page |
| plotTopGeneEffectPerCell | Man page |
| plotTopGeneEffectPerCell,GeneEffect-method | Man page |
| plotTopGeneEffectPerGroup | Man page |
| plotTopGeneEffectPerGroup,GeneEffect-method | Man page |
| rnai | Man page |
| show | Man page |
| show,CCLEMutationData-method | Man page |
| show,GeneEffect-method | Man page |
