plotPca: Principal component analysis plot
In acidgenomics/r-deseqanalysis: Acid Genomics DESeq2 Analysis Utilities
plotPca R Documentation
Principal component analysis plot
Description
Principal component analysis plot
Usage
plotPca(object, ...)
## S4 method for signature 'DESeqAnalysis'
plotPca(object, ...)
Arguments
object
Object.
...
Additional arguments.
Details
Passes to SummarizedExperiment defined in AcidPlots package.
Value
ggplot.
Functions
-
plotPca(DESeqAnalysis): Extracts DESeqTransform, converts to
RangedSummarizedExperiment, and passes to method defined in AcidPlots.
Note
Updated 2022-09-27.
See Also
-
DESeq2::plotPCA.
Examples
data(deseq)
## DESeqAnalysis ====
plotPca(deseq)
acidgenomics/r-deseqanalysis documentation built on March 30, 2024, 12:08 p.m.
R Package Documentation
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| plotPca | R Documentation |
Principal component analysis plot
Description
Principal component analysis plot
Usage
plotPca(object, ...)
## S4 method for signature 'DESeqAnalysis'
plotPca(object, ...)
Arguments
object |
Object. |
... |
Additional arguments. |
Details
Passes to SummarizedExperiment defined in AcidPlots package.
Value
ggplot.
Functions
-
plotPca(DESeqAnalysis): ExtractsDESeqTransform, converts toRangedSummarizedExperiment, and passes to method defined in AcidPlots.
Note
Updated 2022-09-27.
See Also
-
DESeq2::plotPCA.
Examples
data(deseq)
## DESeqAnalysis ====
plotPca(deseq)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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