plotPca: Principal component analysis plot

plotPcaR Documentation

Principal component analysis plot

Description

Principal component analysis plot

Usage

plotPca(object, ...)

## S4 method for signature 'DESeqAnalysis'
plotPca(object, ...)

Arguments

object

Object.

...

Additional arguments.

Details

Passes to SummarizedExperiment defined in AcidPlots package.

Value

ggplot.

Functions

  • plotPca(DESeqAnalysis): Extracts DESeqTransform, converts to RangedSummarizedExperiment, and passes to method defined in AcidPlots.

Note

Updated 2022-09-27.

See Also

  • DESeq2::plotPCA.

Examples

data(deseq)

## DESeqAnalysis ====
plotPca(deseq)

acidgenomics/r-deseqanalysis documentation built on March 30, 2024, 12:08 p.m.