infomapConsole: Function to run the infomap console application from within...
In adamkocsis/obigeo: Occurrence-based biogeography

infomapConsole

R Documentation

Function to run the infomap console application from within R.

Description

This function reaches out from R, runs infomap, and loads its output to R. The infomap executable should be added to the system path environment variable (could be run from any directory).

Usage

infomapConsole(graph, bipartite, cargs = NULL, feedback = FALSE)

Arguments

`graph`	(`igraph`) A graph.
`bipartite`	(`logical`) Is the graph bipartite? The readin function will use this piece of information.
`cargs`	Argumentation run with the console
`feedback`	(`logical`) Should the functions output information about progress?