readOneArcasHLAGenotypeFile: Extract all HLA typing from one genotypes json file
In adeschen/arcasHLATools: Tools to ease the extraction and manipulation of HLA typing produced by arcasHLA software
Description
Usage
Arguments
Value
Author(s)
Examples
Description
TODO
Usage
1
readOneArcasHLAGenotypeFile(file_path, extension = ".genotype.json")
Arguments
file_path
a character string corresponding to the
name of the arcasHLA genotype file.
extension
a character string correpondint to the extension
of the genotype file. The extension will be removed from the file name which
is going to be assigned to the dataset. Default=".genotype.json".
Value
TODO
Author(s)
Astrid Deschenes
Examples
1
2
3
4
5
6
## Path to an arcasHLA genotype file
jsonFile <- system.file("extdata/arcasHLAFiles", "Sample002.genotype.json",
package = "arcasHLATools")
## Extracting file information
readOneArcasHLAGenotypeFile(jsonFile)
adeschen/arcasHLATools documentation built on June 7, 2019, 5:10 a.m.
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Description Usage Arguments Value Author(s) Examples
Description
TODO
Usage
1 | readOneArcasHLAGenotypeFile(file_path, extension = ".genotype.json")
|
Arguments
file_path |
a |
extension |
a |
Value
TODO
Author(s)
Astrid Deschenes
Examples
1 2 3 4 5 6 | ## Path to an arcasHLA genotype file
jsonFile <- system.file("extdata/arcasHLAFiles", "Sample002.genotype.json",
package = "arcasHLATools")
## Extracting file information
readOneArcasHLAGenotypeFile(jsonFile)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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