Man pages for adw96/DivNet
Diversity Estimation in Networked Ecological Communities
| acomb3 | acomb3 |
| B2 | OTU data from Sinha et al. (2017) |
| B2_phyloseq | Species data from Sinha et al. (2017) in phyloseq format |
| bc_fast | Bray-Curtis Distance (Fast) |
| bray_curtis_true | Bray-Curtis Distance (True) |
| divnet | divnet |
| DivNet-package | DivNet package documentation. |
| euc_fast | Euclidean Distance (Fast) |
| euclidean_true | Euclidean Distance (True) |
| fit_aitchison | fit_aitchison |
| Lee | phyloseq object from Lee et al (2015) |
| make_alpha_estimates | Make alpha estimates |
| make_w | Simulate counts |
| MCmat | MCmat |
| MCrow | MCrow |
| OLS | OLS function |
| pick_base | pick_base |
| plot.diversityEstimates | Plot function |
| print.diversityEstimates | Print function |
| shannon_true | Shannon Index |
| simplifyBeta | A function to facilitate viewing and manipulating beta... |
| simpson_true | Simpson Index |
| stars | stars |
| testBetaDiversity | Test beta diversity |
| testDiversity | Test diversity |
| to_composition_matrix | to_composition_matrix |
| to_log_ratios | to_log_ratios |
