stars: stars
In adw96/DivNet: Diversity Estimation in Networked Ecological Communities
stars R Documentation
stars
Description
Estimate the network using the package pulsar to select the tuning parameter.
Type 'DivNet::stars' to see the chosen defaults. To modify the defaults,
create a new function and pass it as the 'network' argument to MCmat.
Usage
stars(sigma, W, base, perturbation, ncores, ...)
Arguments
sigma
current estimate of sigma
W
corresponding count matrix
base
OTU index used for base
perturbation
size of purturbation used for to_log_ratios, defaults to 0.05
ncores
number of cores to use, defaults to 1
...
other arguments to pass
adw96/DivNet documentation built on Oct. 2, 2023, 11:49 a.m.
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| stars | R Documentation |
stars
Description
Estimate the network using the package pulsar to select the tuning parameter. Type 'DivNet::stars' to see the chosen defaults. To modify the defaults, create a new function and pass it as the 'network' argument to MCmat.
Usage
stars(sigma, W, base, perturbation, ncores, ...)
Arguments
sigma |
current estimate of sigma |
W |
corresponding count matrix |
base |
OTU index used for base |
perturbation |
size of purturbation used for to_log_ratios, defaults to 0.05 |
ncores |
number of cores to use, defaults to 1 |
... |
other arguments to pass |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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