afcov_heatmap: plot heatmap of subnational covid data

In afrimapr/africovid: Visualisation of Sub-National Covid Data for Africa

Description

*in progress to show cases or deaths Initial ggplot code copied from https://github.com/VictimOfMaths/COVID-19/blob/master/Heatmaps/English%20LA%20Heatmaps.R

Usage

afcov_heatmap(
  country,
  attribute = "CONTAMINES",
  areanames = "namesgeob",
  dates = "all",
  language = "en",
  legend.position = "top",
  palette = "YlGnBu",
  timeinterval = NULL,
  date_legend = c("2020-04", "2020-05", "2020-06", "2020-07", "2020-08", "2020-09",
    "2020-10", "2020-11", "2020-12", "2021-01", "2021-02", "2021-03", "2021-04",
    "2021-05")
)

Arguments

country	a character vector of country names or iso3c character codes.
attribute	attribute to plot, from dfhera
areanames	name of column containing the area names ('namesgeob' added to match geoboundaries, 'REGION' is in raw data )
dates	either 'all', 'last' or c(start,end) in format "2021-01-31"
language	'which admin level to return'en' or 'fr' for country name
legend.position	default "top", options "left","right","bottom"
palette	RColorBrewer palette options default="YlGnBu"
timeinterval	optional interval to sum over, options e.g. "5 days" "week" "month"
date_legend	axis breaks to appear in plots

Value

ggplot

Examples

afcov_heatmap('Mali')

afcov_heatmap('senegal', dates=c("2021-01-01","2021-04-01"))

afrimapr/africovid documentation built on June 2, 2021, 8:57 a.m.