qc_flag_interpolate: Manually flag and interpolate bad data (R workflow)

In afsc-gap-products/gapctd: Process CTD data from bottom trawl surveys

Manually flag and interpolate bad data (R workflow)

Description

Visually inspect plots of depth versus salinity, and depth versus pressure. Flag data for removal in a GUI and interpolate missing data. Write interpolated data to output/manual_flag

Usage

qc_flag_interpolate(x, review = "density", bin_var = "depth")

Arguments

x	oce object
review	variable to review ("density", "temperature", "salinity", "oxygen", "ph"). Default = "density"
bin_var	Which channel to use for binning measurements for plotting ("depth" or "pressure").

Value

An oce object with flagged scans/bins interpolated and derived quantities recalculated. Replaced scans/bins have flag = 7.

Author(s)

Sean Rohan

afsc-gap-products/gapctd documentation built on March 5, 2025, 3:42 a.m.