deg_deseq2: Select diffentially expressed genes(DGEs) from a DESeqDataSet...
In ahmedelmahy/RNASeqclassifier1: A collection of functions for feature selection and classifier development from RNASeq data.
Description
Usage
Arguments
Value
Description
Select diffentially expressed genes(DGEs) from a DESeqDataSet object
Usage
1
deg_deseq2(counts, class, padj_i = 0.01, logfc_i = 1, keepn)
Arguments
counts
matrix
class
a class vector
logfc_i
A lower threshold for log fold change
keepn
Number of genes to keep
padj
A upper threshold for p adjusted value
Value
A vector of selected DEGs
ahmedelmahy/RNASeqclassifier1 documentation built on May 25, 2019, 2:24 p.m.
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Description Usage Arguments Value
Description
Select diffentially expressed genes(DGEs) from a DESeqDataSet object
Usage
1 | deg_deseq2(counts, class, padj_i = 0.01, logfc_i = 1, keepn)
|
Arguments
counts |
matrix |
class |
a class vector |
logfc_i |
A lower threshold for log fold change |
keepn |
Number of genes to keep |
padj |
A upper threshold for p adjusted value |
Value
A vector of selected DEGs
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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