API for airr-community/ogrdbstats
Analysis of Adaptive Immune Receptor Repertoire Germ Line Statistics
| Global functions | |
|---|---|
| add_hap_stats | Source code |
| allele_number | Source code |
| apply_gaps | Source code |
| build_nt_diff_string | Source code |
| calc_genotype | Source code |
| calc_haplo_details | Source code |
| cc_at | Source code |
| ccs_at | Source code |
| conc_at | Source code |
| concs_at | Source code |
| cumul_at | Source code |
| cumul_cons | Source code |
| cumul_row | Source code |
| cumuls_at | Source code |
| example_rep | Man page |
| extract_frag | Source code |
| find_nearest | Source code |
| gap_input_sequences | Source code |
| gene_family | Source code |
| gene_number | Source code |
| generate_ogrdb_report | Man page Source code |
| genotype_statistics_cmd | Man page Source code |
| getMutatedAA | Source code |
| imgt_gap | Source code |
| imgt_gap_inferred | Source code |
| insert_at | Source code |
| label_5_nuc | Source code |
| label_nuc | Source code |
| make_barplot_grobs | Man page Source code |
| make_genotype_db | Source code |
| make_haplo_grobs | Man page Source code |
| make_novel_base_grobs | Man page Source code |
| nuc_at | Source code |
| nucs_at | Source code |
| order_alleles | Source code |
| plot_allele_seqs | Source code |
| plot_base_composition | Source code |
| plot_base_heatmap | Source code |
| plot_cdr3_lengths | Source code |
| plot_cumulative_consensus_base_composition | Source code |
| plot_differential | Source code |
| plot_segment_composition | Source code |
| plot_trailing_triplet | Source code |
| read_inferred_sequences | Source code |
| read_input_files | Man page Source code |
| read_input_sequences | Source code |
| read_reference_genes | Source code |
| report | Source code |
| report_note | Source code |
| report_warn | Source code |
| seq_to_num | Source code |
| sort_alleles | Source code |
| unique_calls | Source code |
| unique_cdrs | Source code |
| write_genotype_file | Man page Source code |
| write_plot_file | Man page Source code |
