write_genotype_file: Write the genotype file required by OGRDB
In airr-community/ogrdbstats: Analysis of Adaptive Immune Receptor Repertoire Germ Line Statistics
View source: R/genotype_statistics.R
write_genotype_file R Documentation
Write the genotype file required by OGRDB
Description
Write the genotype file required by OGRDB
Usage
write_genotype_file(filename, segment, chain_type, genotype)
Arguments
filename
name of file to create (csv)
segment
one of V, D, J
chain_type
one of H, L
genotype
genotype data frame
Value
None
Examples
genotype_file = tempfile("ogrdb_genotype")
write_genotype_file(genotype_file, 'V', 'H', example_rep$genotype)
file.remove(genotype_file)
airr-community/ogrdbstats documentation built on Feb. 17, 2025, 5:05 p.m.
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View source: R/genotype_statistics.R
| write_genotype_file | R Documentation |
Write the genotype file required by OGRDB
Description
Write the genotype file required by OGRDB
Usage
write_genotype_file(filename, segment, chain_type, genotype)
Arguments
filename |
name of file to create (csv) |
segment |
one of V, D, J |
chain_type |
one of H, L |
genotype |
genotype data frame |
Value
None
Examples
genotype_file = tempfile("ogrdb_genotype")
write_genotype_file(genotype_file, 'V', 'H', example_rep$genotype)
file.remove(genotype_file)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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