show_populations_enrichment: show_populations_enrichment
In alex-wenzel/ChromaSC-R: Plots gene set enrichment along a single cell RNA-seq linear pseudotime trajectory
Description
Plots the enrichment of a multiple populations along pseudotime
Usage
1
show_populations_enrichment(escores, trajs, gene_sets)
Arguments
escores
The gene set by cell enrichment score matrix calculated by 'run_enrichment()'
trajs
A list of vectors of pseudotime values named by cells found in the columns of 'escores'
gene_sets
The names of gene sets to visualize (subset of the 'rownames' of 'escores')
alex-wenzel/ChromaSC-R documentation built on Nov. 1, 2019, 9:09 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description
Plots the enrichment of a multiple populations along pseudotime
Usage
1 | show_populations_enrichment(escores, trajs, gene_sets)
|
Arguments
escores |
The gene set by cell enrichment score matrix calculated by 'run_enrichment()' |
trajs |
A list of vectors of pseudotime values named by cells found in the columns of 'escores' |
gene_sets |
The names of gene sets to visualize (subset of the 'rownames' of 'escores') |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.