Description Usage Arguments Examples
This function allows you to create an HTML from a text file with a predefined structure
1 2 3 | LinksFile2Html(lFile, outputDir, info.list, categs.descs = NULL,
categs.names = NULL, IndexDir = "", UEB = TRUE,
resultsFileName = "ResultFiles")
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lFile |
Input file consisting of 4 tab separated fields: Filename, Categ, Subcateg, Description |
outputDir |
Name of the directory where the HTML is to be written |
info.list |
List with informations to build the header: To, Description, Analysts, Contact |
categs.descs |
Description of categories in the links file (Header of sections) |
categs.names |
Short names for categories in the links file (to be used in the input file) |
IndexDir |
Name of subdirectory where the files to be linked are located |
UEB |
TRUE if UEB header is to be used |
resultsFileName |
Name of output file |
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 | linksFileName <-"LinksFileName_Example.csv"
resultsDir <- "."
# UEB <- TRUE # if UEB == TRUE => UEB header is used
htmlInfo <- list(To = "My Client", # nomClients,
Description = "Analysis of Biological Significance for some selected gene list",
Analysts = "Ferran Brianso and Alex Sanchez", # analistes,
Contact = "Alex Sanchez (alex.sanchez@vhir.org)")
GENCategs <- myGENCategs()
fcategs <- GENCategs[["categs"]]
fNames <- GENCategs[["noms"]]
# Invoke main function
# Not run automatically. Check by yourself uncommenting next lines
# setwd("examples")
# LinksFile2Html(linksFileName, resultsDir, htmlInfo,
# categs.descs = fCategs, categs.names = fNames,
# IndexDir = "", UEB = TRUE, resultsFileName="Resultats")
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