import_BED: Import a BED
In alextidd/tgp: Target Gene Prediction
import_BED R Documentation
Import a BED
Description
Import a BED file as a tibble
Usage
import_BED(bedfile, metadata_cols = NULL)
Arguments
bedfile
A tab-delimited file in bed format with columns: chrom, start, stop, ...(metadata cols)...
metadata_cols
A character vector of the names of metadata columns (bedfile cols 4+) in the BED file, to be imported as metadata in the tibble BED. These must be in the same order as they appear in the file, starting from column 4.
Value
A tibble representation of the BED file, optionally with metadata columns. If no metadata column names are provided, only the chrom, start and stop columns will be returned.
alextidd/tgp documentation built on June 1, 2022, 9:25 a.m.
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| import_BED | R Documentation |
Import a BED
Description
Import a BED file as a tibble
Usage
import_BED(bedfile, metadata_cols = NULL)
Arguments
bedfile |
A tab-delimited file in bed format with columns: chrom, start, stop, ...(metadata cols)... |
metadata_cols |
A character vector of the names of metadata columns (bedfile cols 4+) in the BED file, to be imported as metadata in the tibble BED. These must be in the same order as they appear in the file, starting from column 4. |
Value
A tibble representation of the BED file, optionally with metadata columns. If no metadata column names are provided, only the chrom, start and stop columns will be returned.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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