| allele_stats | Gets allele stats |
| allele_stats_ | Gets allele stats |
| asmap_prog | Runs mstmap for a linkage groups of map objects that satisfy... |
| asmap_step | A wrapper around ASMap::mstmap with some error handling.... |
| bind_map_list | Bind a list of mapdfs together |
| bp_cross | A biparental cross object |
| bp_map | A biparental map object |
| check_parents_ | Checks informativeness of parents |
| convert_rel | Convert absolute scores to relative |
| convert_rel_ | Convert absolute scores to relative (standard-evaluation) |
| convertScore | Converts a single marker, typically a row in a data.frame. |
| geno2df | Convert R/qtl genotyping data into data.frame |
| genoComp | Take a linkage group from a cross object, convert into long... |
| genoPlot | Plot genotype data for a linkage group |
| genoSeg | Compares segregation of markers based on agreement of two... |
| get_lg_lengths | Get linkage group extents |
| get_lg_names | Title |
| get_lg_stats | Returns the maximum distance between markers for a linkage... |
| get_map_coords | Get offsets for linkage groups |
| ggholman | ONLY FOR BACKWARDS COMPATIBILITY - Produce a plot of a... |
| ggholmans | Produce a plot of a trinomial distribution in a Holmans'... |
| ggholmans.theme | A theme for trinomial plots |
| isHet | Checks genotype scores for heterozygosity |
| isHomo | Checks genotype scores for homozygosity |
| join2maps | Join two map dfs |
| longmaps | Take output from /codejoin2maps() and put into long form for... |
| m4_cross | A multiparental cross object |
| m4_int | An mpwgaim mpInterval object |
| m8_cross | A multiparental cross object |
| make_nptest_classes | Converts a character vector of genotype scores into two... |
| map2df | Convert R/qtl map into a tidy data.frame |
| revmap | Reverse particular linkage groups in a map from a cross... |
| revmaplgs | Take output from /codejoin2maps() and a map object to be... |
| revvec | Provide the 'mirror image' of a vector, especially of... |
| trixy | Convert trinomial distribution into x y values Takes a... |
